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基于XCT技術(shù)的原位根系三維可視化研究
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3-D Root System in Situ Based on XCT Technology
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    摘要:

    為解決植物根系原位三維觀測的技術(shù)難題,采用XCT層析成像技術(shù)獲取原位根系的斷層序列圖像,然后利用計(jì)算機(jī)圖像圖形處理技術(shù)實(shí)現(xiàn)對(duì)植物根系的原位三維可視化。為了提高圖像分割的精確性,提出一種利用根系幾何形態(tài)特征的綜合分割方法,有效清除了與根系密度極其近似的雜質(zhì)體素,完成了對(duì)序列圖像的三維分割。并利用VTK工具箱采用移動(dòng)立方體算法(MC)實(shí)現(xiàn)了對(duì)分割后序列圖像的三維重建。編程實(shí)驗(yàn)證實(shí),本文提出的技術(shù)路線和方法能夠有效地實(shí)現(xiàn)對(duì)生長在介質(zhì)環(huán)境中原位根系的三維可視化觀測。

    Abstract:

    The root is an important plant organ for nutrient and water uptake from the surrounding soil. To solve the technical problem of 3-D observation for plant roots in situ, sequence images of plant roots in situ were acquired at first with using X-ray CT scanner, and then the 3-D visualization of roots in situ was implemented in computer using image and graph processing methods. In order to improve the accuracy of segmenting root CT images, a compositive segmentation algorithm was proposed and implemented based on the spatial geometrical and morphological features of root systems. The algorithm could clean markedly up the pixels of non-root regions of which the gray levels were very similar to roots regions and the positions were very closed to roots regions. 3-D surface models of plant roots were reconstructed with marching cubes (MC) algorithm, and 3-D visualization of plant roots in situ was implemented with the tool box of VTK. It was proved by programming experiment that the approach and methods proposed were feasible and effective for 3-D visualization of plant roots in situ.

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周學(xué)成,羅錫文.基于XCT技術(shù)的原位根系三維可視化研究[J].農(nóng)業(yè)機(jī)械學(xué)報(bào),2009,40(Z1):202-205.3-D Root System in Situ Based on XCT Technology[J]. Transactions of the Chinese Society for Agricultural Machinery,2009,40(Z1):202-205.

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